BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011F08LP1|AL426247
(787 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1076 1533 0.0
>3x_Contig1076
Length = 4245
Score = 1533 bits (772), Expect = 0.0
Identities = 784/788 (99%), Gaps = 1/788 (0%)
Strand = Plus / Plus
Query: 1 cgcatgaattatgattacctgagca-ggattgcagataagagcatcaatataatgagagg 59
||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3162 cgcatgaataatgattacctgagcaaggattgcagataagagcatcaatataatgagagg 3221
Query: 60 aatccttggccagttccatttggtgaacagatcaataaataaaccagacaatagtcgtga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3222 aatccttggccagttccatttggtgaacagatcaataaataaaccagacaatagtcgtga 3281
Query: 120 acttgtagagaaaagggcaaactgcgtcaaaacgttgaaagaggatccaggcccaagtat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3282 acttgtagagaaaagggcaaactgcgtcaaaacgttgaaagaggatccaggcccaagtat 3341
Query: 180 caagcttgtcaggtttaccatgtttgtgttgaacatttccatgacccccatactgaggag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3342 caagcttgtcaggtttaccatgtttgtgttgaacatttccatgacccccatactgaggag 3401
Query: 240 cattactatcaggaatgcgtatgcwatataatcttggaaaaagtttctgatcctcttata 299
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3402 cattactatcaggaatgcgtatgcaatataatcttggaaaaagtttctgatcctcttata 3461
Query: 300 aaactcgcctttatttccactagcaagtaatagcgtggtttcatcttcaagtacaatagc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3462 aaactcgcctttatttccactagcaagtaatagcgtggtttcatcttcaagtacaatagc 3521
Query: 360 atccgctcttgctgatgcatgcgatgctgatggagattgagaaccacgaagcttaatgat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3522 atccgctcttgctgatgcatgcgatgctgatggagattgagaaccacgaagcttaatgat 3581
Query: 420 agaaatcgtactagtggaaatccatgtcaacaaaaatacaaacgtgtagaagacagcgaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3582 agaaatcgtactagtggaaatccatgtcaacaaaaatacaaacgtgtagaagacagcgaa 3641
Query: 480 cgatttaaagacaacagcaagatctaggtaaccgtcctctttagaatggaaccatggtaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3642 cgatttaaagacaacagcaagatctaggtaaccgtcctctttagaatggaaccatggtaa 3701
Query: 540 tttaattacctgcaacccaattacggaggataatccaaaacatgtcgtggggaaactgat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3702 tttaattacctgcaacccaattacggaggataatccaaaacatgtcgtggggaaactgat 3761
Query: 600 tgacaatagttttgtatcggggtacagctttgcacaagtwattaaagcgcaaaagtacag 659
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 3762 tgacaatagttttgtatcggggtacagctttgcacaagtaattaaagcgcaaaagtacag 3821
Query: 660 cgaactggtagcgattccaacaattgcaaatgccactacggagagggcaaaacatggatc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3822 cgaactggtagcgattccaacaattgcaaatgccactacggagagggcaaaacatggatc 3881
Query: 720 ggatcccaactggaaaacacaagataggtataaatagctgggaacgaaaccaatgaagga 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3882 ggatcccaactggaaaacacaagataggtataaatagctgggaacgaaaccaatgaagga 3941
Query: 780 aagccaac 787
||||||||
Sbjct: 3942 aagccaac 3949
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5168
Number of Sequences: 1807
Number of extensions: 5168
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 787
length of database: 10,358,551
effective HSP length: 16
effective length of query: 771
effective length of database: 10,329,639
effective search space: 7964151669
effective search space used: 7964151669
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)